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Friday the 19th of March, 2010 |
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p5-eval most recent diffversion
Scroll down toward the bottom of the page to get installation instructions for p5-eval. The raw portfile for p5-eval is located here: http://p5-eval.darwinports.com/dports/perl/p5-eval/Portfile Find related portfiles with the unique DarwinPorts.com search feature. Check for any related Fink projects here: pdb.finkproject.org/pdb/package.php/p5-eval The p5-eval Portfile 56410 2009-08-27 06:30:44Z blb PortSystem 1.0 PortGroup perl5 1.0 perl5.setup eval 2.2.8 Category: perl biology Maintainers: cse.wustl.edu:rpz Description: Perl module for parameter estimation with hidden Markov models. Long Description: iPE is parameter estimation software for generalized hidden Markov models. For information and documentation, see http://genes.cse.wustl.edu. Homepage: http://mblab.wustl.edu Master Sites: http://mblab.wustl.edu/software/download/ use_configure no build {} test {} destroot.cmd {} destroot { set installvendorlib [perl5.extract_config installvendorlib] file mkdir ${destroot}${installvendorlib} xinstall -m 0644 -W ${worksrcpath} Eval.pm GTF.pm ${destroot}${installvendorlib} xinstall -m 0755 -W ${worksrcpath} combine_eval_reports.pl eval.pl evaluate_gtf.pl filter_badlist.pl filter_gtfs.pl get_distribution.pl get_general_stats.pl get_overlap_stats.pl gff3_to_gtf.pl graph_gtfs.pl make_intron_lenght_vs_performance_graph.pl validate_gtf.pl validate_splice_sites.pl ${destroot}${prefix}/bin } Platform: darwin Checksums: md5 9a28468ac7fc801abfa2fa7979537e17 If you haven't already installed Darwin Ports, you can find easy instructions for doing so at the main Darwin Ports page. Once Darwin Ports has been installed, in a terminal window and while online, type the following and hit return:
% cd /opt/local/bin/portslocation/dports/p5-evalYou will then be prompted for your root password, which you should enter. You may have to wait for a few minutes while the software is retrieved from the network and installed for you. Y ou should see something that looks similar to: Make sure that you do not close the terminal window while Darwin Ports is working. Once the software has been installed, you can find further information about using p5-eval with these commands: % man p5-eval Where to find more information:
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